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. 2009 Dec 17;27(4):800–810. doi: 10.1093/molbev/msp281

Table 1.

Some Examples of Genomes Where There Is a Large Difference between the Average and the Mode.

Organism CDSa G + Cb G + C3c Averaged Moded Difference
Synechococcus elongatus PCC 6301 2525 55.8 58.4 45.5 65.2 19.6
Fusobacterium nucleatum subsp. nucleatum ATCC 25586 2075 27.4 12.5 66.5 83.1 16.6
Ureaplasma urealyticum serovar 7 681 26.0 12.0 62.3 78.6 16.3
Methanosphaera stadtmanae DSM 3091 1523 29.1 13.5 51.1 65.5 14.3
Pyrobaculum islandicum DSM 4184 1978 49.5 53.0 39.3 52.6 13.3
Clostridium perfringens str. 13 2732 29.4 16.4 57.0 69.9 12.9
Lactobacillus acidophilus NCFM 1866 35.2 25.0 44.4 56.1 11.7
Staphylococcus aureus subsp. aureus COL 2618 33.5 22.5 59.9 70.7 10.8
Streptococcus pneumonia pneumoniae D39 2162 40.6 35.9 38.2 48.2 10.0
Borrelia burgdorferi B31 1688 28.9 21.2 50.3 58.0 7.7
a

Number of coding sequences in genome (all replicons combined).

b

Percentage G + C for protein-encoding genes.

c

Mean G + C content for nucleotides in the third codon position.

d

Percentage of genes matching the modal or average codon usage for the entire genome of that organism.