Table 3.
The Distance between the Modal Codon Usages of Agrobacterium tumefaciens Replicons.
Replicon 1 | Replicon 2 | Distance between Replicon Modes | Distance between Shuffled Repliconsa |
Circular chromosome | Linear chromosome | 0.062 | 0.035 ± 0.006 |
Circular chromosome | pAt | 0.423 | 0.049 ± 0.009 |
Circular chromosome | pTi | 0.469 | 0.068 ± 0.009 |
Linear chromosome | pAt | 0.390 | 0.053 ± 0.012 |
Linear chromosome | pTi | 0.430 | 0.069 ± 0.008 |
pAt | pTi | 0.106 | 0.067 ± 0.007 |
Average ± standard deviation of distances between codon-usage modes of simulated replicons with a random partitioning of the combined set of genes.