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. 2010 Jan 13;2:83–101. doi: 10.1093/gbe/evq001

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© The Author(s) 2010. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution.

This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.5), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.

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FIG. 4.— — Alignment of confirmed Class 1 sequences to the reference genome. The reference sequence is represented at the top of each panel with information from FlyBase (www.flybase.com) regarding genes located in the region in question. The sample sequence is shown at the bottom. e values, the number of mismatches and the number of gaps (top to bottom) for each aligning portion of the sample sequence are shown underneath the corresponding sequence. (A). A typical example confirming a Class 1 event. (B). A Class 1 event that includes multiple duplications and inversions within the coding regions of the gustatory receptor genes Gr28a and Gr28b. (C). A Class 1 event with a small, nearby insertion. (D). A Class 1 event with an additional inverted duplication.