Table 1.
Comparison of the E. histolytica organellar DNA polymerase 1 (EhODP1) with DNA polymerases mostly encoded in mitochondrial plasmids.
| Organism | AN | Cod | L | I | S | AA | Score | E |
|---|---|---|---|---|---|---|---|---|
| (aa) | (%) | (%) | compared | |||||
| T. vaginalis | A2ECW5 | nd | 1232 | 33 | 53 | 929 | 447 | 1e−123 |
| F. velutipes | Q9GBS2 | M | 925 | 22 | 40 | 781 | 116 | 8e−24 |
| Gelasinospora sp | 003684 | M (Gel-kal) | 987 | 21 | 39 | 847 | 116 | 8e−24 |
| A. immersus | P22374 | M (Pa12) | 1202 | 25 | 42 | 494 | 108 | 2e−21 |
| C. perniciosa | Q6U7U2 | M | 899 | 21 | 39 | 642 | 107 | 4e−21 |
| S. kluyveri | Q09038 | M (pSKL) | 999 | 24 | 40 | 654 | 102 | 1e−19 |
| N. intermedia | P33538 | M (kalilo) | 969 | 22 | 41 | 514 | 102 | 1e−19 |
| P. etchellsii | Q9C130 | C (pPE1B) | 1013 | 23 | 41 | 541 | 78 | 3e−12 |
| K. lactis1 | P09804 | M (pGKL-1) | 995 | 24 | 39 | 771 | 97 | 7e−18 |
| K. lactis2 | P05468 | M (pGKL-2) | 994 | 22 | 41 | 668 | 92 | 2e−16 |
| P. purpurea | O99973 | M | 620 | 23 | 41 | 541 | 78 | 3e−12 |
| A. aegerita | O78938 | M | 571 | 22 | 41 | 515 | 83 | 1e−13 |
| P. kluyveri | O21376 | M (pPK2) | 1118 | 20 | 39 | 531 | 63 | 1e−07 |
| M. conica | Q9TEH5 | M (pMC3-2) | 901 | 28 | 44 | 216 | 60 | 1e−07 |
| P. anserina | Q01529 | M (pAL2-1) | 1197 | 22 | 40 | 614 | 59 | 2e−06 |
AN (UniProtKB/TrEMBL Accession Number). Cod (Coded in mitochondrion (M) or cytoplasm (C) or not determined (nd)). L (Total aa length of the protein). I (Identity). S (Similarity). E (Expected value).