Table 3.
Proteins identified after C/M extraction of a whole banana meristem lysate combined with one-dimensional gradient (1D) SDS PAGE
| Accessiona | Closest homolog | M r | pI | TMH | GRAVY | Location |
|---|---|---|---|---|---|---|
| A7Q777 | Chromosome chr18 scaffold_59, whole genome shotgun sequence (Vitis vinifera) | 39.18 | 5.39 | 1 | −0.153 | Cell wall |
| P38076 | Cysteine synthase (Triticum aestivum) | 34.11 | 5.48 | 0 | 0.07 | Cytosol |
| P48534 | l-ascorbate peroxidase, cytosolic (Pisum sativum) | 27.06 | 5.52 | 0 | −0.332 | Cytosol |
| P29448 | Thioredoxin H-type 1 (Arabidopsis thaliana) | 12.67 | 5.64 | 0 | 0.034 | Cytosol |
| Q5JL11 | Putative soluble inorganic pyrophosphatase (Oryza sativa subsp. Japonica) | 23.62 | 5.88 | 0 | −0.31 | Cytosol |
| O23714 | Proteasome subunit beta type-2-A (Arabidopsis thaliana) | 22.54 | 5.95 | 0 | −0.034 | Cytosol |
| P34921 | Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (Dianthus caryophyllus) | 36.9 | 6.46 | 0 | −0.143 | Cytosol |
| Q9AYP4 | 40S ribosomal protein S10 (Oryza sativa) | 20.26 | 9.76 | 0 | −0.878 | Cytosol-ribosome |
| Q8H0X6 | Cysteine proteinase inhibitor 6 (Arabidopsis thaliana) | 23.47 | 5.66 | 1 | −0.353 | Endomembrane system |
| Q07078 | Heat shock protein 81-3 (Oryza sativa) | 80.18 | 4.98 | 0 | −0.599 | Mitochondrion |
| Q9FWR4 | Glutathione S-transferase DHAR1, mitochondrial (Arabidopsis thaliana) | 23.64 | 5.56 | 0 | −0.173 | Mitochondrion |
| P47922 | Nucleoside diphosphate kinase 1 (Pisum sativum) | 16.46 | 5.94 | 0 | −0.064 | Mitochondrion |
| P17783 | Malate dehydrogenase, mitochondrial (Citrullus lanatus) | 33.24 | 6.26 | 0 | 0.135 | Mitochondrion |
| P27084 | Superoxide dismutase [Mn], mitochondrial precursor (Pisum sativum) | 25.82 | 7.16 | 0 | −0.269 | Mitochondrion |
| Q6K548 | Mitochondrial outer membrane protein porin (Oryza sativa subsp. Japonica) | 29.09 | 7.21 | 18 β | −0.16 | Mitochondrion |
| O48646 | Probable phospholipid hydroperoxide glutathione peroxidase 6, mitochondrial (Arabidopsis thaliana) | 19.61 | 7.85 | 0 | −0.277 | Mitochondrion |
| A5AHP2 | Chromosome chr15 scaffold_37, whole genome shotgun sequence-Putative uncharacterized protein (Vitis vinifera) | 31.95 | 9.61 | 1 | −0.124 | Mitochondrion |
| Q2PF08 | ADP,ATP carrier protein 1, mitochondrial (Trifolium pratense) | 39.9 | 9.84 | 3 | 0.007 | Mitochondrion |
| Q9LT08 | 26S proteasome non-ATPase regulatory subunit 14 (Arabidopsis thaliana) | 34.35 | 6.31 | 0 | −0.243 | Nucleus |
| A7PF22 | Chromosome chr11 scaffold_13, whole genome shotgun sequence (Vitis vinifera) | 15.69 | 6.1 | 1 | 0.113 | Nucleus-cytosol |
| Q7XLR1 | Probable aquaporin PIP2-6 (Oryza sativa) | 29.96 | 9.08 | 5 | 0.483 | Plasma membrane |
| P04907 | Glutathione S-transferase 3 (Zea mays) | 23.72 | 6.06 | 0 | 0.066 | Plastid |
| Q08682 | 40S ribosomal protein Sa-1 (Arabidopsis thaliana) | 32.29 | 5.05 | 0 | −0.316 | Ribosome |
| P59263 | Ubiquitin (Arabidopsis thaliana) | 8.52 | 6.56 | 0 | −0.445 | Ribosome |
| B9IJE3 | Predicted protein (Populus trichocarpa) | 35.87 | 5.55 | 0 | −0.016 | Unknown |
| P49036 | Sucrose synthase 2 (Zea mays) | 92.94 | 6.03 | 0 | −0.282 | Unknown |
| P52578 | Isoflavone reductase homolog (Solanum tuberosum) | 33.85 | 6.16 | 0 | −0.063 | Unknown |
| Q6L4X6 | Os05g0508400 protein (Oryza sativa) | 66.32 | 7 | 0 | −0.448 | Unknown |
| A9PIA4 | Predicted protein-Putative uncharacterized protein (Populus trichocarpa) | 24.28 | 7.02 | 0 | −0.028 | Unknown |
| Q0DIK0 | Os05g0383000 (Oryza sativa) | 17.89 | 7.7 | 1 | −0.222 | Unknown |
| Q39613 | Peptidyl-prolyl cis–trans isomerase (Catharanthus roseus) | 18.28 | 8.36 | 0 | −0.27 | Unknown |
| Q0J8X2 | Os04g0683100 protein (Oryza sativa) | 29.1 | 9.82 | 0 | −0.392 | Unknown |
| P21616 | Pyrophosphate-energized vacuolar membrane proton pump (Phaseolus aureus) | 79.85 | 5.32 | 15 | 0.647 | Vacuole |
| P24091 | Endochitinase B (Nicotiana tabacum) | 31.47 | 8.31 | 0 | −0.322 | Vacuole |
| P07979 | Lichenase (Nicotiana plumbaginifolia) | 37.48 | 9.63 | 1 | −0.128 | Vacuole |
aSwissprot accession number, the closest protein homolog, physicochemical properties; relative molecular masses (M r, ×1,000), pI, the number of transmembrane helices (TMH, determined by Aramemnon), GRAVY scores and the location are shown