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. 2010 Mar 19;5(3):e9765. doi: 10.1371/journal.pone.0009765

Table 4. Primers used for the amplification and sequencing of the nine genetic loci evaluated for the B. quintana MLST scheme.

Locus Putative gene product Product size (bp) Position on chromosome (bp) 1 Forward primer (5′-3′) Reverse primer (5′-3′)
atpF ATP Synthase ß-chain 606 391.779–392.384 catcagagcatgcagatcgt cgatgcacaatcatttctgg
bqtR B. quintana transcriptional regulator 622 76.463–77.084 ttgcgacaaaacagcttcac gatggagcatctgcactcaa
ftsZ cell devision protein ftsZ 531 1.036.753–1.037.283 ccatagcaaaagcatcagca aattgaagccacgcattacc
gap glyceraldehyde 3-phosphate dehydrogenase 612 1.408.521–1.409.132 caaaaccaatcccacagctt ttgcgtgctattgtggagag
gltA citrat synthase 558 811.826–812.383 gcggttatcctatcgaccaa ctgctgcgatacatgcaaat
groEL Heat shock protein 60 chaperone 569 1.277.324–1.277.892 attggaggcattggagtgtc cgcgtaaaccaaatcaaggt
nlpD lipoprotein, outer membrane protein 548 584.964–585.511 gacgctttctcctgatggtc tcaataaacgccctcgtacc
ribE riboflavin synthase α-chain 575 654.876–655.450 gttcggaaatgaccgttgtt gcttgtccccaagttgtcat
rpoB RNA polymerase ß-subunit 605 847.962–847.358 tggtgatcgggtagagaagg gacgcgcataaacattacga
1

Corresponding to the complete genome sequence of B. quintana strain Toulouse/copy Uppsala, GenBank accession number BX897700.1.