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. Author manuscript; available in PMC: 2010 Mar 19.
Published in final edited form as: Genet Epidemiol. 2008 Sep;32(6):505–512. doi: 10.1002/gepi.20323

TABLE II.

SNP minor allele frequencies among parents of 298 CL/P cases from four populations

Minor allele frequency
No. SNP Name Physical locationa Minor allele Taiwan Singapore Korea Maryland
1 rs7771980 45,497,267 C 0.041 0.068 0.086 0.069
2 rs2677104 45,503,851 C 0.273 0.322 0.233 0.150
3 rs2819855 45,508,372 A 0.446 0.457 0.480 0.395
4 rs2819854 45,512,506 A 0.403 0.440 0.395 0.458
5 rs910586 45,518,290 T 0.039 0.042 0.053 0.283
6 rs2819853 45,520,635 G 0.036 0.042 0.039 0.283
7 rs765724 45,525,096 T 0.039 0.042 0.053 0.289
8 rs1343799 45,529,608 G 0.036 0.042 0.039 0.283
9 rs2819861 45,532,918 A 0.036 0.042 0.039 0.293
10 rs2790103 45,540,243 T 0.040 0.042 0.053 0.276
11 rs2790093 45,545,462 G 0.036 0.042 0.039 0.279
12 rs2790098 45,550,428 C 0.036 0.042 0.053 0.279
13 rs4714854 45,555,912 T 0.036 0.042 0.053 0.279
14 rs9472494 45,559,814 T 0.041 0.042 0.086 0.300
15 rs2396442 45,564,959 C 0.049 0.042 0.086 0.274
16 rs1934328 45,573,731 T 0.295 0.212 0.250 0.454
17 rs7773875 45,580,276 C 0.253 0.186 0.178 0.189
18 rs7771889 45,594,185 G 0.293 0.254 0.243 0.276
19 rs10485422 45,597,170 A 0.031 0.017 0.072 0.226
20 rs6904353 45,601,061 T 0.034 0.025 0.086 0.416
21 rs13207392 45,604,434 T 0.034 0.025 0.087 0.264
22 rs7748231 45,609,530 G 0.034 0.025 0.086 0.417
23 rs10948237 45,615,272 A 0.034 0.025 0.086 0.417
24 rs1928533 45,617,802 C 0.029 0.025 0.072 0.400

SNP, single nucleotide polymorphism; CL/P, cleft lip with or without cleft palate.

a

Based on NCBI Human Genome build 35.1.