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. Author manuscript; available in PMC: 2010 Mar 24.
Published in final edited form as: Biochemistry. 2009 Mar 24;48(11):2394–2402. doi: 10.1021/bi802293m

Table 2.

Structural Accuracy of Lys73-Misligated Structures

Model RMSDa Qa Qcuta CE scorea
Pure-funnel 6.5 +/− 0.6 0.21 +/− 0.01 0.36 +/− 0.01 2.1 +/− 0.6
Electrostatic
/ Collapse
3.2 +/− 0.4 0.25 +/− 0.01 0.37 +/− 0.02 4.4 +/− 0.3
Hydrogen
Bonding
3.5 +/− 0.4 0.25 +/− 0.01 0.36 +/− 0.01 4.2 +/− 0.4
a

The NMR structure of the Lys79Ala Lys73-misligated structure is compared to 30 structures randomly selected from the free energy minima calculated from each simulation.