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. 2010 Feb 8;11:99. doi: 10.1186/1471-2164-11-99

Table 3.

Taxonomic distribution of proteins sharing a glycine-rich domain found in 12 TvBspA.

Taxa Bit Scorea E-valuea No. of
hitsb
Top hit annotation
Trichomonas vaginalis G3 335 2.0E-90 12 (51) Surface antigen BspA-like

Flavobacteria bacterium MS024-3C 84 8.0E-15 1 Hypothetical protein

Clostridium phage phiCD27 71 6.0E-11 1 Hypothetical protein

Clostridium phage phi CD119 71 7.0E-11 1 Hypothetical protein

Clostridium difficile ATCC 43255 70 7.0E-10 2 Hypothetical protein

Clostridium difficile QCD-63q42 70 2.0E-10 3 Hypothetical protein

Clostridium difficile QCD-37×79 68 6.0E-10 1 Hypothetical protein

Clostridium difficile 630 65 6.0E-09 2 Hypothetical protein

Bacillus cereus Rock4-18 58 4.0E-07 1 FG-GAP repeat protein

aThe values for the top BlastP hits (query: TVAG_174900 GRD, residues 1-267, E-value <1.0E-4) only are shown. The complete taxonomic report listing all hits is given in additional file 13, Table S8. The taxa are listed by decreasing bit scores. The shown values for T. vaginalis correspond to the non-self top hit, entry TVAG_191460.

bThe values give the number of hits per genome. The 12 TvBspA possessing the GRD were hit and include the query sequence. There is an additional 51 T. vaginalis proteins that possess a related GRD that do not possess TpLRR.