Table 1. Characteristics of the different selected housekeeping genes.
Gene name | Abbreviation | Function | Accession IDs | 5′-Primers-3′ (forward/reverse) | Size (bp) |
---|---|---|---|---|---|
ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) | ATP5G3 | Oxydative phosphorylation | NM_001002258.4 | GGATTTGCCTTGTCTGAAGC CGTACATTCCCATGACACCA | 188 |
β-2-Microglobulin | B2M | β-Chain of major histocompatibility complex class 1 molecules | NM_004048 | CTCACGTCATCCAGCAGAGA TCTTTTTCAGTGGGGGTGAA | 198 |
β-Actin | ACTB | Cytoskeletal structural protein | NM_001101 | GGGGTGTTGAAGGTCTCAAA GGCATCCTCACCCTGAAGTA | 183 |
β-Glucuronidase | GUSB | Exoglycosidase in lysosomes | NM_000181 | CTGTACACGACACCCACCAC ATTCGCCACGACTTTGTT | 208 |
Cyclophilin A | PPIA | Serine–threonine phosphatase inhibitor | NM_021130 | ACCGTGTTCTTCGACATTGC GGCATGAATATTGTGGAGGC | 410 |
Glyceraldehyde-3-phosphate dehydrogenase | GAPDH | Glycolysis enzyme | NM_002046 | GAGTCCACTGGCGTCTTCAC GGTGCTAAGCAGTTGGTGGT | 177 |
Hypoxanthine phosphoribosyltransferase 1 | HPRT1 | Hydrolase in carbohydrate metabolism | NM_000194 | TGCTCGAGATGTGATGAAGG TCCCCTGTTGACTGGTCATT | 181 |
Phosphoglycerate kinase 1 | PGK1 | Glycolysis enzyme | L00159 | GAAGTGGAGAAAGCCTGTGC CTCTGTGAGCAGTGCCAAAA | 159 |
TATA-box-binding protein | TBP | General RNA polymerase II transcription factor | M55654 | TGCCTCCAGAATATGCCTCT CAATGGTTTTCAAGCTTTCCA | 203 |
Transferrin receptor (p90, CD71) | TFRC | Cellular iron uptake | X01060 | GGAGAATCCTGGGGGTTATG GCTTTCAGCATTTGCAACCT | 202 |
For each gene, both forward and reverse primers sequences are given with the expected PCR amplimer size.