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. Author manuscript; available in PMC: 2010 Mar 25.
Published in final edited form as: Physiol Genomics. 2008 Apr 15;34(1):65–77. doi: 10.1152/physiolgenomics.00199.2007

Table 2.

Genomic organization of exons encoding rat NAVR/AVR

Exon Number

NAVR AVR Intron 3′ Seq Exon Termini Intron 5′ Seq Exon Size, bp Intron Size, bp Functional Domain in Exon
1 From 1st (*), 2nd (**), 3rd (***)
   initiator seq (Fig. 1)
85*/490**/589*** NAVR +1
From +1
1 gtgagt 29b 535 Initiating M
From aa1 ~GCTCCAG
2 cccag CTCGGAG
~CTGCAGA
gtaagc 272 238
3 tccag GGCTCGG
~GTGTCGG
gtaagt 36 210
4 tacag AGTACAA
~TGAAGGG
gtgagt 1,753 746 AVP bd/Gs
1 AGACTTa
~TGAAGGG
gtgagt 1,088 746 AVR +1
initiating M
AVP bd/Gs
5 2 tccag TTCTCAA
~TTCTGAC
gtgagt 93 1,027
6 3 cacag CTTGTCA
~CACTCAG
gtaagg 171 75
7 4 cacag GATACAG
~CCCTCAG
gtaaag 168 422 ANG II bd
8 5 tgcag TCTGACT
~GGTGGGC
834 Poly(A)
mRNA size, bp
3,412* 2,354
3,902**
4,001***

Seq, nucleotide sequence;

a

AVR transcription RNA initiation site determined by rapid amplification of 5′ cDNA ends (5′-RACE);

b

NAVR exon 1 size determined from initiation-methionine consensus sequence; M, methionine; bd, binding domain; Gs, Gs activator domain.

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