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. 2010 Mar 16;11:134. doi: 10.1186/1471-2105-11-134

Table 2.

Time for analysis of chromosome 2 imputed data (220,833 SNPs).

Model Option No. people CPU time
Linear - 500 0 m 43 s
1000 1 m 23 s
1500 2 m 10 s

Linear --robust 500 0 m 50 s
1000 1 m 43 s
1500 2 m 35 s

Linear --mmscore 500 16 m 18 s
1000 92 m 45 s
1500 231 m 49 s

Logistic - 500 3 m 20 s
1000 6 m 38 s
1500 10 m 8 s

Logistic --robust 500 3 m 25 s
1000 6 m 53 s
1500 10 m 29 s

Cox PH - 500 2 m 18 s
1000 4 m 30 s
1500 6 m 43 s

In all analyzes, 2 covariates were included in the model.