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. Author manuscript; available in PMC: 2011 Jan 21.
Published in final edited form as: J Phys Chem B. 2010 Jan 21;114(2):952–958. doi: 10.1021/jp906790f

Figure 7.

Figure 7

1D-PMF profiles of ion passage through five channels. In PMF profiles, the red line is Cl profile, the blue line is K+ profile and the dashed line is the electrostatic free energy profile. Three snapshots show the Cl position corresponding to the z coordinates in the PMF profile. βCD is in licorice with atom type colors; Cl in green ball; protein and TIP3 water molecules are not shown here.