Table 3.
Features detected by BlastX and/or BlastN in atypical regions lacking annotated genes.
| Name | Features |
|---|---|
| c1r1 | Short mitochondrial genome part |
| c1r27 | Fragments of transposons, 1 DDE1 transposon |
| c1r29 | Pseudogene |
| c2r14 | Pseudogene, 1 gypsy transposon |
| c2r17 | Fragments of transposons, 2 DDE1 transposons |
| c2r27 | Pseudogene |
| c3r2 | Pseudogene, 3 hAT transposons, 1 DDE1 tansposon |
| c3r7 | Highly conservated transposon with in frame stops, 1 DDE1 transposon |
| c3r8 | Pseudogene |
| c3r9 | 2 DDE1 transposons |
| c3r12 | Numerous pseudogenes and fragments of transposons, 3 DDE1 transposons |
| c3r14 | Pseudogene, 1 gypsy transposon |
| c3r16 | Pseudogene |
| c3r20 | Transposon-like element, 4 gypsy transposons, 1 LINE transposon |
| c4r1 | Fragments of transposons, 1 DDE1 transposon |
| c4r5 | 28S rRNA, 4 LINE transposons |
| c4r6 | 18S rRNA |
| c4r14 | Fragments of transposons, 2 DDE1 transposons |
| c4r19 | Transposon-like element, 1 gypsy transposon, 3 LINE transposons |
| c5r2 | 1 LINE transposon |
| c6r2 | Partial transposons and pseudogene, 5 gypsy transposons, 3 LINE transposons |
| c6r3 | Plasmid part |
| c6r14 | Partial transposons and pseudogene, 1 gypsy transposon, 2 LINE transposons |
| c6r15 | 1 LINE transposon |
| c6r21 | Pseudogene, 2 TY1Copia transposons |
| c6r22 | 1 DDE1 tranposon |
| c6r26 | 5S rRNA |
| c7r13 | Partial transposons and pseudogene, 2 gypsy transposons, 1 LINE transposon |
Nomenclature of atypical regions is defined as follow: "c1" indicates the chromosome number and "r2" references the # of this region on the chromosome.