Table 8.
Structure |
|||||||||
---|---|---|---|---|---|---|---|---|---|
X-ray | NMR | Simulation |
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1 | 2 | 3 | 4 | 5 | 6 | 7 | |||
aΔEint/kcal mol−1 | −3.9 | 5.08 | 4.46 | 3.17 | 0.46 | 0.14 | 3.2 | −1.23 | 1.1 |
b number of structures | 1 | 20 | 2000 | 2000 | 2000 | 2000 | 2000 | 2000 | 2000 |
c Cβ-Cβ/nm | 0.59 | 0.57 | 0.46 | 0.50 | 0.72 | 0.75 | 0.51 | 0.53 | 0.61 |
d Cβ-Cβ/nm | - | 0.68 ± 0.12 | 0.48 ± 0.08 | 0.47 ± 0.07 | 0.74 ± 0.14 | 0.89 ± 0.44 | 0.57 ± 0.07 | 0.61 ± 0.19 | 0.56 ± 0.06 |
c Rcent/nm | 0.57 | 0.90 | 0.73 | 0.74 | 0.97 | 1.06 | 0.98 | 0.58 | 1.02 |
d Rcent/nm | - | 0.83 ± 0.13 | 0.65 ± 0.12 | 0.64 ± 0.12 | 0.97 ± 0.19 | 1.08 ± 0.44 | 0.78 ± 0.19 | 0.83 ± 0.26 | 0.95 ± 0.15 |
Energy of the interaction between the aromatic rings of Tyr1 and Tyr10.
Number of structures used to determine the average distances.
The distance in the X-ray structure, the first of the NMR structures and the middle structure from the largest cluster from the MD simulations.
The average and standard deviation of the distance.