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. 2010 Apr 1;6(4):e1000834. doi: 10.1371/journal.ppat.1000834

Table 2. Genes with a P-value above the threshold but showing an induction of two fold or more in two independent experiments.

Gene fold P-value Annotation
A1S_1788 5.3 0.071 Ethanol dehydrogenase Zn-dependent
A1S_0482 4.3 0.084 Acetate kinase
A1S_0704 2.3 0.095 Hypothetical protein pfam 09981: DUF2218
A1S_2148 3.4 0.105 Acetyl-CoA synthetase, COG0365
A1S_1577 23 0.066 flavoprotein involved in K+ transport COG2072
A1S_3301 4.1 0.107 Predicted membrane protein, COG31622.1
A1S_2710 2.5 0.076 Type II Citrate synthase(gltA)
A1S_0179 3.1 0.121 Predicted flavodoxin, COG0655
A1S_3008 4.8 0.115 acetyl-CoA carboxylase, COG4799
A1S_0359 3.9 0.108 Predicted β-lactamase, COG1680
A1S_0618 2.5 0.126 MarR transcriptional regulator, COG1846
A1S_1601 2.7 0.119 Malate synthase G, cd00728
A1S_1380 3.6 0.162 Predicted porine, cd0342
A1S_3167 2 0.186 PilY, COG3419
A1S_3413 3.5 0.131 Amino acid permease cl00524
A1S_3901 2.9 0.084 Hypothetical protein
A1S_1305 3.3 0.065 Outer membrane protein OmpA superfamily
A1S_0355 3.1 0.096 ExonucleaseV gamma subunit

2.1This gene is located upstream of A1S_3300, acetate permease, that is included in Table 1. The coding region of these genes is only 1 bp apart, therefore, they may be part of a single operon. The order of these genes is highly conserved in proteobacteria.