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. Author manuscript; available in PMC: 2011 Feb 1.
Published in final edited form as: Nat Protoc. 2010 Mar 25;5(4):725–738. doi: 10.1038/nprot.2010.5

Figure 4.

Figure 4

An illustrative example of the I-TASSER result page showing (a) top ten threading templates and the alignments for the query protein identified by LOMETS; and (b) structural analogs and their alignment with the I-TASSER model, as identified by TM-align from the PDB library. The quality of the threading alignment in (a) is evaluated based on their normalized Z-score (highlighted in orange), where a normalized Z-score >1 reflects a good alignment. The ranking of the analogs shown in (b) is based on the TM-score (highlighted in green) of the structural alignment.