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. 2010 Feb 5;76(8):2657–2662. doi: 10.1128/AEM.01092-09

TABLE 1.

PCR primers and FISH probes developed in this study

Primer or probe Sequence (5′-3′) Target, specificity Temp (°C)a % FAb
Primers
    64F GGA CGG TAA CAT TGT GGT GC 16S rRNA gene, X. bocki gammaproteobacterial endosymbiont 54
    1417F CGA AGG AGA GAC GGA GAA GGT TAG 23S rRNA gene, X. bocki gammaproteobacterial endosymbionts (sequencing primer) 59
Probes
    Cps-1353modc GAC GTT ATT GCT GAC ACG 16S rRNA, X. bocki chlamydial endosymbiont and relatives 15
    XenoGam441 ATA GCC TTC CTC AGT GAT 16S rRNA, X. bocki gammaproteobacterial endosymbiont 15
    XenoGam666 CGG AAA TTC CTC TAC CC 16S rRNA, X. bocki gammaproteobacterial endosymbiont and relatives 15
    XenoGam727 TCC AGG TAG ACG CCT TC 16S rRNA, X. bocki gammaproteobacterial endosymbiont and relatives 15
a

Temp, applied primer annealing temperature for PCR.

b

FA, applied formamide concentration in the hybridization buffer for FISH.

c

Modified from reference 28.