TABLE 2.
Primers used in this study
| Primer | Sequence (5′ to 3′) | Description |
|---|---|---|
| Km1-I out | GAGCTCGAATTCGGCCTAG | For identification of transposon-inserted gene |
| Km1-O out | CCTGCAGGCATGCAAGCTTC | For identification of transposon-inserted gene |
| Real-time-pmrIF | CACGTCCAGTGGCAGATAAC | For real-time PCR; paired with Real-time-pmrIR |
| Real-time-pmrIR | CCCCATTTCAGTGGCTAAAC | Paired with Real-time-pmrIF |
| pmrI-F1 | GCGTCCTCGGTATTTTATCC | For complementation and PpmrI full-length sequencing; paired with pmrI-R |
| pmrI-R | ACATCGACTCTCAAGCCAAC | Paired with pmrI-F1 |
| pmrI-R1 | CACATACCGTATACTTCTGATG | For PpmrI full-length sequencing |
| pmr-promoter-F | CAACAATCGTTAGCTTTGCC | For reporter assay; paired with pmr-promoter-R |
| pmr-promoter-R | GGAGAATGGAAGAAAGTGAC | Paired with pmr-promoter-F |
| pmr-promoter-F2 | TTGTCTACAAGGTGGCAGTA | For EMSA; paired with pmr-promoter-R |
| pmrI-upF | ATCGCGGTAGTGCAATTAAG | For PpmrI knockout; paired with Xba-pmrI-upR |
| Xba-pmrI-upR | TCTAGACCAACACAGCCAATATCATG | Paired with pmrI-upF |
| Xba-pmrI-downF | TCTAGATATCGAAACACGCCAAACGG | For PpmrI knockout; paired with pmrI-downR1 |
| pmrI-downR1 | TTCCCCGACAATCACTATTG | Paired with Xba-pmrI-downF |
| RppA-F EcoRI | CGGAATTCATGAATATTTTATTAGTTGA | For His-tagged RppA expression; paired with RppA-R XhoI |
| RppA-R XhoI | CCGCTCGAGAAGAGCGGATCTTCATTTAG | Paired with RppA-F EcoRI |