TABLE 3.
Genes intact or present in strain F relative to strain Ra
| F strain locus | Gene changeb | R strain locus | Predicted gene product |
|---|---|---|---|
| MGF_0017 | F | MGA_1322d/625 | ABC-type multidrug/protein/lipid (MdlB-like) transport system component |
| MGF_0872 | F | MGA_0829 | conserved hypothetical lipoprotein |
| MGF_1196 | F | MGA_0908/11 | unique hypothetical membrane protein |
| MGF_2103 | I | putative transposase | |
| MGF_2868 | I | putative transposase | |
| MGF_3370 | F | MGA_1284/5 | ABC transporter ATP-binding protein |
| MGF_3373 | I | unique hypothetical protein | |
| MGF_3468 | F | MGA_1350 | hypothetical protein fragment |
| MGF_3470 | Iu | MGA_1349 | conserved hypothetical protein |
| MGF_3484 | Iu | conserved hypothetical protein | |
| MGF_3486 | Iu | ABC-type maltose/maltodextrin transporter permease MalC | |
| MGF_3501 | Iu | ABC-type maltose/maltodextrin transporter permease MalG | |
| MGF_3505 | Iu | ABC-type maltose/maltodextrin transporter ATP-binding protein MalK | |
| MGF_3514 | Iu | unique hypothetical protein | |
| MGF_3519f | Iu | alpha amylase superfamily protein (fragmented) | |
| MGF_3529 | Iu | GntR-family transcriptional regulator | |
| MGF_3537 | Iu | pullulanase | |
| MGF_3555 | Iu | putative alpha,alpha-phosphotrehalase | |
| MGF_3567 | Iu | MGA_1265 | maltose phosphorylase |
| MGF_3987 | F | MGA_1364 | unique hypothetical protein |
| MGF_4139 | I | putative transposase | |
| MGF_4207f | I | MGA_1083 | PTS lichenan-specific IIA component (fragmented) |
| MGF_4515 | F | MGA_1014 | unique hypothetical protein |
| MGF_5077 | F | MGA_0487 | conserved hypothetical protein |
| MGF_5456 | B | MGA_1358 | unique hypothetical protein |
| MGF_5547 | F | MGA_0583/4 | conserved hypothetical protein |
a
Genes longer by at least 10% in length by deletion, frameshift, or premature stop relative to intact ortholog, and not likely the result of incorrect start codon prediction.
b
F, F strain gene of full-length relative to R strain; I, gene encoded in sequence present in F strain but absent in R strain; Iu, gene encoded in 17-kbp unique region; B, gene potentially fragmented in both R and F strains.