Table 2.
Genetic variation in PGES, EP2, and EP4 and risk of colorectal adenomaa
Gene | SNP | Genotypeb | Cases | Controls | OR | 95%CI | pc | p-trend |
---|---|---|---|---|---|---|---|---|
PGES | −1254T>C | TT | 435 | 526 | 1.00 | – | ||
TC or CC | 40 | 40 | 1.28 | 0.79-2.07 | 0.32 | NA | ||
−664A>T | AA | 397 | 468 | 1.00 | – | |||
AT or TT | 86 | 114 | 0.94 | 0.67-1.30 | 0.69 | NA | ||
211A>G | AA | 313 | 381 | 1.00 | – | |||
AG | 147 | 175 | 1.10 | 0.83-1.45 | ||||
GG | 22 | 21 | 1.23 | 0.64-2.36 | 0.70 | 0.40 | ||
1152G>A | GG | 429 | 510 | 1.00 | – | |||
GA or AA | 54 | 72 | 0.92 | 0.62-1.36 | 0.66 | NA | ||
3006G>A | GG | 459 | 546 | 1.00 | – | |||
GA or AA | 24 | 36 | 0.86 | 0.49-1.51 | 0.60 | NA | ||
13425A>C | AA | 435 | 526 | 1.00 | – | |||
|
|
AC or CC |
40 |
40 |
1.28
|
0.79-2.07 |
0.40 |
NA |
EP2 | −1722A>G | AA | 171 | 222 | 1.00 | – | ||
AG | 234 | 269 | 1.22 | 0.92-1.62 | ||||
GG | 78 | 89 | 1.20 | 0.81-1.77 | 0.35 | 0.23 | ||
−967G>A | GG | 436 | 531 | 1.00 | – | |||
GA or AA | 47 | 51 | 1.14 | 0.74-1.78 | 0.55 | NA | ||
−616G>C | GG | 367 | 444 | 1.00 | – | |||
GC or CC | 116 | 137 | 1.01 | 0.75-1.36 | 0.96 | NA | ||
1690G>A | GG | 448 | 539 | 1.00 | – | |||
GA or AA | 34 | 43 | 1.05 | 0.64-1.73 | 0.83 | NA | ||
4950G>A | GG | 400 | 448 | 1.00 | – | |||
GA or AA | 83 | 134 | 0.71 | 0.52-0.99 | 0.04 | NA | ||
9814C>A | CC | 288 | 349 | 1.00 | – | |||
CA | 159 | 197 | 1.00 | 0.76-1.32 | ||||
AA | 36 | 35 | 1.10 | 0.66-1.85 | 0.93 | 0.80 | ||
12010G>A | GG | 342 | 406 | 1.00 | – | |||
AG | 122 | 157 | 0.96 | 0.72-1.29 | ||||
AA | 19 | 19 | 1.03 | 0.52-2.05 | 0.96 | 0.89 | ||
15674G>A | GG | 311 | 384 | 1.00 | – | |||
AG | 145 | 177 | 1.01 | 0.76-1.33 | ||||
|
|
AA |
27 |
21 |
1.41
|
0.76-2.62 |
0.55 |
0.48 |
EP4 | Val294Ile | Val/Val | 476 | 565 | 1.00 | – | ||
Val/Ile | 20 | 25 | 0.93 | 0.49-1.75 | 0.82 | NA | ||
−1529G>A | GG | 186 | 238 | 1.00 | – | |||
GA | 218 | 263 | 0.91 | 0.69-1.20 | ||||
AA | 79 | 79 | 0.81 | 0.55-1.19 | 0.54 | 0.27 | ||
−1408G>A | GG | 251 | 326 | 1.00 | – | |||
GA | 199 | 223 | 0.87 | 0.66-1.13 | ||||
AA | 32 | 31 | 0.84 | 0.49-1.45 | 0.53 | 0.28 | ||
−1307G>A | GG | 169 | 166 | 1.00 | – | |||
GA | 211 | 293 | 1.42 | 1.06-1.91 | ||||
AA | 103 | 123 | 1.19 | 0.83-1.70 | 0.06 | 0.23 | ||
−132C>G | CC | 401 | 475 | 1.00 | – | |||
CG or GG | 82 | 106 | 0.89 | 0.64-1.24 | 0.49 | NA | ||
1455A>G | AA | 175 | 225 | 1.00 | – | |||
AG | 203 | 254 | 0.90 | 0.68-1.20 | ||||
GG | 86 | 88 | 0.81 | 0.56-1.19 | 0.54 | 0.27 | ||
2472A>G | AA | 137 | 182 | 1.00 | – | |||
AG | 222 | 280 | 0.92 | 0.68-1.25 | ||||
GG | 122 | 120 | 0.74 | 0.52-1.06 | 0.23 | 0.11 | ||
6374G>A | GG | 278 | 351 | 1.00 | – | |||
GA | 181 | 199 | 0.86 | 0.66-1.13 | ||||
AA | 24 | 32 | 1.13 | 0.63-2.03 | 0.46 | 0.63 | ||
8907G>A | GG | 219 | 278 | 1.00 | – | |||
GA | 206 | 240 | 0.90 | 0.69-1.18 | ||||
AA | 58 | 64 | 0.89 | 0.58-1.36 | 0.71 | 0.45 | ||
11851G>A | GG | 379 | 454 | 1.00 | – | |||
GA or AA | 103 | 128 | 1.06 | 0.78-1.45 | 0.71 | NA | ||
13877A>C | AA | 257 | 315 | 1.00 | – | |||
AC | 196 | 223 | 0.90 | 0.69-1.18 | ||||
CC | 29 | 43 | 1.22 | 0.72-2.06 | 0.49 | 1.00 | ||
13981A>G | AA | 178 | 195 | 1.00 | – | |||
AG | 220 | 289 | 1.27 | 0.95-1.68 | ||||
GG | 85 | 98 | 1.05 | 0.72-1.53 | 0.23 | 0.50 |
Adjusted for age and sex.
The homozygous variant and heterozygous genotypes are grouped together if <10 cases or <10 controls were of the homozygous variant genotype.
Likelihood ratio test of a model containing dummy variables for each SNP + age and sex vs. a model containing only age and sex.