Skip to main content
. Author manuscript; available in PMC: 2011 Feb 1.
Published in final edited form as: Cancer Epidemiol Biomarkers Prev. 2010 Jan 19;19(2):547–557. doi: 10.1158/1055-9965.EPI-09-0869

Table 3.

Genetic variation in PGDH and risk of colorectal adenomaa

SNP Genotypeb Cases Controls OR 95%CI pc p-trend
−1868G>A GG 359 437 1.00
GA or AA 124 145 1.10 0.82-1.48 0.51 NA
−1635G>A GG 121 164 1.00
GA 238 288 1.22 0.89-1.66
AA 122 128 1.31 0.91-1.88 0.30 0.14
343C>A CC 412 511 1.00
CA or AA 70 71 1.31 0.90-1.91 0.16 NA
Gln52Gln GG 171 192 1.00
GA 225 283 0.97 0.73-1.29
AA 84 104 1.00 0.68-1.45 0.98 0.94
782A>G AA 338 384 1.00
AG 129 187 0.76 0.57-1.01
GG 15 10 1.51 0.64-3.56 0.09 0.29
1113G>A GG 374 464 1.00
GA or AA 109 118 1.14 0.84-1.56 0.41 NA
1543G>A GG 137 155 1.00
GA 214 287 0.78 0.58-1.07
AA 131 139 0.95 0.67-1.35 0.24 0.73
3580G>A GG 297 337 1.00
GA 161 220 0.84 0.64-1.10
AA 25 25 1.15 0.62-.13 0.37 0.53
9442A>G AA 223 298 1.00
AG 210 217 1.21 0.92-1.58
GG 50 66 0.95 0.62-1.46 0.32 0.63
9691C>A CC 247 286 1.00
CA 187 249 0.89 0.68-1.17
AA 48 47 1.29 0.81-2.05 0.28 0.77
12184A/- AA 375 427 1.00
A/- or -/- 110 136 0.94 0.69-1.28 0.70 NA
13316A>C AA 221 255 1.00
AC 208 259 0.95 0.72-1.24
CC 53 68 0.94 0.61-1.44 0.91 0.69
13796C>T CC 273 322 1.00
CT 177 217 0.99 0.76-1.30
TT 33 43 0.90 0.54-1.50 0.92 0.77
16362G>A GG 282 363 1.00
GA 168 182 1.16 0.88-1.53
AA 33 36 1.06 0.63-1.78 0.57 0.43
17450A>G AA 394 445 1.00
AG or GG 88 135 0.79 0.58-1.09 0.15 NA
18349G>A GG 379 452 1.00
GA or AA 104 129 0.96 0.71-1.31 0.81 NA
19433G>A GG 243 275 1.00
GA 201 259 0.91 0.70-1.19
AA 37 48 0.88 0.54-1.44 0.76 0.47
19979A>T AA 338 378 1.00
AT 135 166 0.96 0.72-1.28
TT 14 19 0.86 0.40-1.84 0.90 0.67
20518A>G AA 160 208 1.00
AG 228 267 1.08 0.81-1.44
GG 95 107 1.12 0.78-1.62 0.79 0.50
23196G>A AA 262 304 1.00
AG 180 243 0.87 0.67-1.14
GG 41 33 1.39 0.83-2.34 0.19 0.82
26646G>A GG 320 381 1.00
GA 141 175 0.98 0.74-1.30
AA 22 26 1.09 0.58-2.06 0.95 0.94
31659A>G AA 356 420 1.00
AG 111 144 0.90 0.67-1.22
GG 14 18 0.92 0.43-1.97 0.79 0.52
a

Adjusted for age and sex.

b

The homozygous variant and heterozygous genotypes are grouped together if <10 cases or <10 controls were of the homozygous variant genotype.

c

Likelihood ratio test of a model containing dummy variables for each SNP + age and sex vs. a model containing only age and sex.

HHS Vulnerability Disclosure