Table 5.

Estimated False Discovery Rates, per Locus, for Northern European Samples Genotyped on the Illumina 550K Array

IBD Size	$\widehat{T}$ a	False Discovery Rate
		BEAGLE	GERMLINE	PLINK (Default)	PLINK (Relaxed)
1-2 cM	2.7e-4	0.004	0.86	N/Ab	0.37
2-3 cM	9.7e-5	0	0.60	0.23	0.46
3-4 cM	5.3e-5	0	0.12	0.33	0.37
4-5 cM	3.2e-5	0	0	0.33	0.30

^aEstimated rate of true IBD of this size, per locus.

^bWhen false-positive rate and power are both 0, the false discovery rate is undefined.