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. Author manuscript; available in PMC: 2010 Apr 8.
Published in final edited form as: Mucosal Immunol. 2009 Oct 28;3(1):29–39. doi: 10.1038/mi.2009.120

Table 1.

Primer sequences of human genes examined by quantitative real-time PCR. AS, antisense; COX-2, cyclooxygenase-2; HPRT, hypoxanthine guanine phosphoribosyltransferase; IFN-β, interferon-β; IL-1β, interleukin-1β; IL-6, interleukin-6; IL-8, interleukin-8; IP-10, 10 kDa interferon-γ-induced protein; MCP-1, monocyte chemotactic protein-1; MIP-2α, macrophage inflammatory protein-2α; MIP-3α, macrophage inflammatory protein-3α; RANTES, regulated upon activation, normal T-cell expressed, and secreted; S, sense; TNF-α, tumor necrosis factor-α.

Target gene Primer sequence
HPRT 5’-CAAGCTTGCTGGTGAAAAGGAC-3’ (S)
5’-GTCAAGGGCATATCCTACAACAAA-3’ (AS)
IL-8 5’-ATAAAGACATACTCCAAACCTTTCCAC-3’ (S)
5’-AAGCTTTACAATAATTTCTGTGTTGGC-3’ (AS)
MIP-3α 5’-GCGGCGAATCAGAAGCA-3’ (S)
5’-GGCCAGCTGCCGTGTG-3’ (AS)
IFN-β 5’-GGCAATTGAATGGGAGGCT-3’ (S)
5’-GGCGTCCTCCTTCTGGAACT-3’ (AS)
IP-10 5’-TGACTCTAAGTGGCATTCAAGGAG-3’ (S)
5’-TTTTTCTAAAGACCTTGGATTAACAGG-3’ (AS)
RANTES 5’-TTTGCCTACATTGCCCGC-3’ (S)
5’-TTTCGGGTGACAAAGACGACT-3’ (AS)
TNF-α 5’-CCCAGGGACCTCTCTCTAATCA-3’ (S)
5’-GCTTGAGGGTTTGCTACAACATG-3’ (AS)
IL-6 5’-GTAGCCGCCCCACACAGA-3’ (S)
5’-CATGTCTCCTTTCTCAGGGCTG-3’ (AS)
IL-1β 5’-AAATACCTGTGGCCTTGGGC-3’ (S)
5’-TTTGGGATCTACACTCTCCAGCT-3’ (AS)
MIP-2α 5’-CGCCCAAACCGAAGTCAT-3’ (S)
5’-GATTTGCCATTTTTCAGCATCTTT-3’ (AS)
MCP-1 5’-ACTCTCGCCTCCAGCATGAA-3’ (S)
5’-TTGATTGCATCTGGCTGAGC-3’ (AS)
COX-2 5’-CCCATGTCAAAACCGAGGTG-3’ (S)
5’-CCGGTGTTGAGCAGTTTTCTC-3’ (AS)