Table 3.
In silico analysis of the available sequences of the genes detected in L. garvieae by CGH
| Gene ID | GenBank accession number of L. garvieae sequence | L. garvieae strain | Similarity with L. lactis subsp. lactis IL1403 gene (%) | Similarity with array probe (%) |
|---|---|---|---|---|
| als | EF450031 | UNIUD074 | 77 | 76 |
| atpD | AX111128 | from patent WO0123604 | 86 | 86 |
| ddl | AF170808 | E. serolicida | 72 | 75 |
| galK | EU153555 | DSM 20684 | 78 | 79 |
| pfk | AB024532 | SA8201 | 85 | 84 |
| tig | AB024531 | SA8201 | 82 | - |
| tuf | AX109994 | from patent WO0123604 | 80 | 77 |
Results for the L. lactis subsp. lactis IL1403 array based-CGH