Table 1.
Gene | SNP | Chr | Base pair | Order in gene | Allelesa | European American MAFb | Hispanic corresponding frequencyc | P-value |
---|---|---|---|---|---|---|---|---|
Wnt3 | rs142167 | 17 | 42150418 | 1 | A/G | 0.258 | 0.523 | <0.0001 |
Wnt3 | rs7216231 | 17 | 42170907 | 2 | A/G | 0.055 | 0.409 | <0.0001 |
Wnt3 | rs199525 | 17 | 42203002 | 3 | G/T | 0.22 | 0.159 | 0.07 |
Wnt3 | rs70602 | 17 | 42214876 | 4 | C/T | 0.219 | 0.149 | 0.041 |
Wnt3 | rs199501 | 17 | 42217772 | 5 | A/G | 0.256 | 0.538 | <0.0001 |
Wnt3 | rs199498 | 17 | 42220763 | 6 | C/T | 0.241 | 0.489 | <0.0001 |
Wnt3 | rs111769 | 17 | 42227151 | 7 | C/T | 0.416 | 0.258 | <0.0001 |
Wnt3 | rs3851781 | 17 | 42246300 | 8 | C/T | 0.474 | 0.657 | <0.0001 |
Wnt3 | hCV1139279 | 17 | 42248220 | 9 | C/G | 0.198 | 0.11 | 0.005 |
Wnt3 | rs9890413 | 17 | 42256448 | 10 | A/G | 0.363 | 0.215 | 0.0002 |
Wnt3A | rs708111 | 1 | 226257988 | 1 | C/T | 0.483 | 0.524 | 0.290 |
Wnt3A | rs708114 | 1 | 226264119 | 2 | C/T | 0.469 | 0.557 | 0.034 |
Wnt3A | rs3094912 | 1 | 226276438 | 3 | A/T | 0.454 | 0.5 | 0.228 |
Wnt3A | rs3121310 | 1 | 226291447 | 4 | A/G | 0.308 | 0.382 | 0.055 |
Wnt3A | rs752107 | 1 | 226313974 | 5 | C/T | 0.308 | 0.356 | 0.175 |
Wnt3A | rs1745420 | 1 | 226318355 | 6 | C/G | 0.144 | 0.178 | 0.193 |
Wnt5A | rs566926 | 3 | 55487719 | 1 | A/C | 0.261 | 0.333 | 0.55 |
Wnt7A | rs1124480 | 3 | 13832970 | 1 | C/T | 0.459 | 0.418 | 0.274 |
Wnt7A | rs9840696 | 3 | 13840076 | 2 | A/G | 0.375 | 0.392 | 0.651 |
Wnt7A | rs6778046 | 3 | 13846680 | 3 | C/T | 0.369 | 0.415 | 0.212 |
Wnt7A | rs9863149 | 3 | 13858361 | 4 | C/T | 0.315 | 0.216 | 0.004 |
Wnt7A | rs934450 | 3 | 13862730 | 5 | A/G | 0.329 | 0.257 | 0.037 |
Wnt7A | rs1433354 | 3 | 13872246 | 6 | A/G | 0.305 | 0.453 | <0.0001 |
Wnt7A | rs6442414 | 3 | 13881839 | 7 | A/G | 0.312 | 0.221 | 0.008 |
Wnt7A | rs11128663 | 3 | 13887851 | 8 | C/G | 0.4 | 0.297 | 0.005 |
Wnt7A | rs4685048 | 3 | 13897736 | 9 | A/C | 0.487 | 0.412 | 0.046 |
Wnt8A | rs4835761 | 5 | 137445768 | 1 | A/G | 0.469 | 0.489 | 0.619 |
Wnt8A | rs2040862 | 5 | 137447888 | 2 | C/T | 0.172 | 0.108 | 0.030 |
Wnt8A | rs2306110 | 5 | 137455986 | 3 | A/C | 0.477 | 0.489 | 0.765 |
Wnt9B | rs2165846 | 17 | 42296365 | 1 | A/G | 0.421 | 0.720 | <0.0001 |
Wnt9B | rs1530364 | 17 | 42306776 | 2 | A/G | 0.261 | 0.317 | 0.128 |
Wnt9B | rs197915 | 17 | 42345521 | 3 | A/G | 0.434 | 0.432 | 0.972 |
Wnt11 | rs663746 | 11 | 75571777 | 1 | C/T | 0.498 | 0.474 | 0.524 |
Wnt11 | rs1533763 | 11 | 75578175 | 2 | A/T | 0.209 | 0.172 | 0.272 |
Wnt11 | rs1533767 | 11 | 75583448 | 3 | A/G | 0.267 | 0.279 | 0.718 |
Wnt11 | rs689095 | 11 | 75591735 | 4 | A/G | 0.307 | 0.324 | 0.667 |
Wnt11 | rs596339 | 11 | 75594155 | 5 | A/G | 0.338 | 0.412 | 0.06 |
Wnt11 | rs1568507 | 11 | 75596967 | 6 | A/T | 0.315 | 0.324 | 0.82 |
aMost common allele are listed first.
bMinor allele frequency.
cFrequency in Hispanic of European American minor allele.