Table 3.
Results of association testing by ethnicity and FHa
Gene | SNP | All | Positive FH | Negative FH | ||||||
---|---|---|---|---|---|---|---|---|---|---|
PDT | Geno-PDT | APL | PDT | Geno-PDT | APL | PDT | Geno-PDT | APL | ||
European Americans | ||||||||||
Wnt3 | rs70602 | 0.154 | 0.308 | 0.041 | 0.309 | 0.585 | 0.009 | 0.299 | 0.426 | 0.365 |
Wnt3 | rs199498 | 0.162 | 0.239 | 0.161 | 0.087 | 0.139 | 0.006 | 1.000 | 0.941 | 0.947 |
Wnt3 | rs9890413 | 0.948 | 0.698 | 0.593 | 0.932 | 0.216 | 0.504 | 0.840 | 0.005 | 0.835 |
Wnt3A | rs752107 | 0.023 | 0.027 | 0.003 | 0.31 | 0.441 | 0.125 | 0.0178 | 0.027 | 0.009 |
Wnt5A | rs566926 | 0.005 | 0.016 | 0.004 | 0.043 | 0.107 | 0.049 | 0.0462 | 0.144 | 0.02 |
Wnt8A | rs2040862 | 0.352 | 0.055 | 0.061 | 0.581 | 0.372 | 0.085 | 0.009 | 0.016 | 0.001 |
Wnt9B | rs197915 | 0.160 | 0.051 | 0.573 | 0.072 | 0.180 | 0.003 | 0.926 | 0.060 | 0.310 |
Wnt11 | rs663746 | 0.067 | 0.001 | 0.449 | 0.104 | 0.047 | 0.278 | 0.361 | 0.014 | 0.849 |
Wnt11 | rs1533767 | 0.114 | 0.012 | 0.001 | 0.744 | 0.010 | 0.100 | 0.006 | 0.016 | 0.003 |
Hispanics | ||||||||||
Wnt3A | rs708111 | NS | NS | NS | 0.034 | 0.135 | 0.007 | 0.297 | 0.426 | 0.005 |
Wnt3A | rs3094912 | 0.343 | 0.572 | 0.031 | NS | NS | NS | 0.162 | 0.240 | <0.001 |
Wnt3A | rs1745420 | 0.083 | 0.157 | <0.001 | 0.096 | 0.264 | 0.009 | 0.346 | 0.376 | 0.008 |
aAll SNPs with P < 0.01 are shown and P ≤ 0.007 are bolded.