. Author manuscript; available in PMC: 2011 Apr 7.

Published in final edited form as: Anal Chim Acta. 2010 Feb 6;664(2):101–113. doi: 10.1016/j.aca.2010.02.001

Table 1.

Sample MDLC proteomic studies.

Approach	Mass spectrometer	No. RP-MS analysis	Biological system	No. identified peptides	No. Identified proteins	Ref.

SCX-RP	LCQ	13	Yeast (S. cerevisiae)	5540^*	1484^*	42
	XCT Ultra	20	HeLa cells	5398	1283	61
	LTQ	9	Mouse liver	5779	2067	46
	Esquire HCT	44	C. glutamicum	2398	695	53
SCX-SAX-RP	LTQ	23	Mouse liver	14105	2804	48
RP-RP	Esquire HCT	31	C. glutamicum	2708	745	53
HILIC-RP	XCT Ultra	20	HeLa cells	5613	1244	61
IMAC-HILIC-RP	LTQ	20	Yeast (S. cerevisiae)	8764^¥	2278^¥	62

These are the combination of data derived from three protein fractions of cell lysate, where the tryptic digest of each protein fraction was analyzed on MUDPIT separately and the identification results from the three protein fractions were merged.

^¥

These numbers refer to the number of identified phosphopeptides and phosphoprotens, respectively.