Table 1.
Established Common Breast-Cancer Susceptibility SNPs proven to affect miRNA binding.
SNP | Gene | Location | Chromosome | Population | No. of cases/controls | Ref | Notes | Genotype and BC risk | Odds Ratio (95% CI; p) |
---|---|---|---|---|---|---|---|---|---|
rs1982073 (T+29C) | TGFB1 | Exonic (missense; Leu10Pro) | 19(q13.2) | European (Netherlands) | 143/3,646 | [27] | CC-carriers have increased risk of BC | 1.4 (1.1–2.0; p=0.04) | |
European | 3,987/3,867 | [28] | TGFB1 Pro variant is more highly secreted by cells | CC vs T-carriers (Pro/Pro vs Leu-carriers) have increased BC risk | 1.21 (1.05–1.37; p= 0.01) | ||||
rs1799782 (580C>T) | XRCC1 | Exonic (missense; Arg194Trp) | 19(q13.31) | Mixed ethnicity (Meta-analysis) | 4,933/6,775 | [22] | Breast cancer together with other cancers | TT+CT vs CC-carriers (Trp/Trp+Arg/Trp vs Arg/Arg-carriers) have lower BC risk | 0.89 (0.81–0.98) |
Mixed ethnicity (Nurses’ Health Study) | 1,004/1,385 | [35] | Association with Breast cancer risk and carotenoids levels | Trp-carriers have a marginal lower risk of BC and a definitely lower risk in association with high carotenoids levels | 0.79(0.60–1.04) alone and 0.32 (0.16–0.61; p=0.003) with high carotenoids levels | ||||
American | 502/502 | [36] | Postmenopausal women | Trp-carriers among postmenopausal women have lower BC risk | 0.62 (0.40–0.95; p<0.05) |