Table 2.

Average, minimum and maximum values of correlation (MCC) obtained by each of software in conditions of article (50) on considered RNA (tRNA, RNase P, 16S RNA and 23S RNA), before adjustment and after adjustment

	MCC values						MCC adjusted values
	Average identity			High identity			Average identity			High identity
	avg	min	max	avg	min	max	avg	min	max	avg	min	max
Mfold	0.46	0.19	0.59	0.46	0.19	0.59	0.46	0.19	0.59	0.46	0.19	0.59
RNAalifold	0.85	0.64	1	0.78	0.59	1	0.79	0.45	1	0.75	0.58	1
Pfold a	0.95	0.9	1	0.85	0.77	0.98	0.81	0.63	1	0.80	0.62	0.98
ILM	0.54	0.40	0.86	0.48	0.29	0.72	0.55	0.38	0.86	0.48	0.29	0.72
CaRNAc	0.78	0.75	0.83	0.79	0.68	0.93	0.76	0.73	0.82	0.75	0.55	0.93
Foldaligna	0.19	0.11	0.27	0.26	0.26	0.27	0.18	0.1	0.27	0.23	0.21	0.26
Dynaligna	0.63	0.32	0.95	0.47	0.4	0.54	0.63	0.31	0.95	0.43	0.33	0.54
Tfold	0.86	0.79	0.95	0.75	0.63	0.97	0.86	0.79	0.95	0.74	0.63	0.97

^aThese software do not provide results for 16S RNA and 23S RNA.