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. Author manuscript; available in PMC: 2011 Mar 23.
Published in final edited form as: Biochemistry. 2010 Mar 23;49(11):2307–2316. doi: 10.1021/bi902077d

Table 2.

Predicted interaction scores and experimentally measured stabilities of triple-helix formation for mixtures of peptides A, B, C at pH 1.0 and 7.0, respectively. Scores and apparent Tm of species showing cooperative unfolding are highlighted in bold.

Mixture Scorea
Apparent Tm
pH 7.0
pH 1.1
pH 7.0d
Eq. 1 Eq. 2 Eq. 2 preheatedb not
preheated
A 20 9 0 N/A N/A
B 30 18 10 N/A N/A
C 29 20 8 N/A N/A
A:2B −7 −3 2 20 20
2A: B −7 −7 0 20 19
B:2C −5 −4 2 N/Ac N/Ac
2B:C −6 −3 2 22 20
A:2C 2 17 4 N/A N/A
2A:C −2 14 2 N/A N/A
A:B:C −29 −4 0 20 19
a

the lowest scores among the scores of the species with the same mixing ratio of peptides but different staggering phases such as AAB, ABA, and BAA are shown.

b

before incubation at 0 °C for 2–3 days, the mixtures are incubated at 40 °C for 15 min.

c

Thermal melting performed after elimination of white precipitates by centrifugation.

d

No triple-helical structure observed for any mixture at pH 1