Table 2.
Predicted interaction scores and experimentally measured stabilities of triple-helix formation for mixtures of peptides A, B, C at pH 1.0 and 7.0, respectively. Scores and apparent Tm of species showing cooperative unfolding are highlighted in bold.
Mixture | Scorea |
Apparent Tm |
|||
---|---|---|---|---|---|
pH 7.0 |
pH 1.1 |
pH 7.0d |
|||
Eq. 1 | Eq. 2 | Eq. 2 | preheatedb | not preheated |
|
A | 20 | 9 | 0 | N/A | N/A |
B | 30 | 18 | 10 | N/A | N/A |
C | 29 | 20 | 8 | N/A | N/A |
A:2B | −7 | −3 | 2 | 20 | 20 |
2A: B | −7 | −7 | 0 | 20 | 19 |
B:2C | −5 | −4 | 2 | N/Ac | N/Ac |
2B:C | −6 | −3 | 2 | 22 | 20 |
A:2C | 2 | 17 | 4 | N/A | N/A |
2A:C | −2 | 14 | 2 | N/A | N/A |
A:B:C | −29 | −4 | 0 | 20 | 19 |
the lowest scores among the scores of the species with the same mixing ratio of peptides but different staggering phases such as AAB, ABA, and BAA are shown.
before incubation at 0 °C for 2–3 days, the mixtures are incubated at 40 °C for 15 min.
Thermal melting performed after elimination of white precipitates by centrifugation.
No triple-helical structure observed for any mixture at pH 1