Skip to main content
. 2010 May;51(5):1157–1172. doi: 10.1194/jlr.M003244

TABLE 4.

Comparison of DChol (green) colocalization with different fluorescent membrane markers (red)

Colocalization Coefficients
Fluorescent PM Markers Mander's
Costes Randomization (N = 200) % (Robs > Rrand) Observed/Random Ratio (mean ± SE)
Mred Mgreen
DHE (n = 22) 0.61 0.56 100% 2.28 ± 0.08 **, #
DiD (n = 23) 0.51 0.50 100% 1.93 ± 0.14 *, # #
Alexa Fluor CT-B (n = 26) 0.59 0.30 100% 2.19 ± 0.13 **, #
BC-θ (n = 14) 0.59 0.27 100% 2.69 ± 0.21 **
N-Rh-DOPE (n = 16) 0.29 0.20 0% 1.49 ± 0.10

DChol and a membrane domain probes were collected in two separate channels. The images were background corrected, threshold was set to select pixels with above average intensities, and regions of interests were drawn to include only the plasma membrane of each cell. Mander's colocalization coefficients Mred and Mgreen were calculated and Costes Randomization Test was performed with ImageJ using Colocalization Test plugin as described in supplementary Method IV. The observed/random ratio was the ratio of the observed percentage of colocalized pixels to the predicted percentage of colocalized pixels assuming a random distribution of both probes. *, **, Significantly different from that of N-Rh-DOPE; #, ##, significantly different from that of BCθ; *, #, P < 0.05; **, # # P < 0.01.