Table 2.
PLINK case-control association results of the case-control sample set.
| Location | unadjusted | |||
|---|---|---|---|---|
| SNP ID | CHR | bp | Gene | p value |
| rs29013431 | 2 | 15,312,400 | 5.99E-03 | |
| rs29012194 | 2 | 26,095,592 | 6.28E-03 | |
| rs29016537 | 2 | 29,654,789 | 1.30E-03 | |
| rs29020907 | 4 | 59,252,723 | IMP2 | 4.97E-04 |
| rs29024570 | 10 | 4,359,586 | 4.30E-04 | |
| AAFC02107025 | 10 | 21,153,203 | DHRS1 | 4.73E-03 |
| rs29024728 | 13 | 28,618,368 | 3.34E-03 | |
| PRNP08 | 13 | 47,214,453 | PRNP | 4.38E-03 |
| rs29021171 | 14 | 10,106,755 | 3.84E-03 | |
| SCAFFOLD51887 | 14 | 43,984,153 | 7.25E-05* | |
| rs29014819 | 15 | 35,713,980 | 7.17E-04 | |
| rs29014820 | 15 | 35,714,095 | 6.05E-04 | |
| rs29014821 | 15 | 35,714,113 | 4.66E-04 | |
| AAFC02014662 | 16 | 65,943,749 | 7.95E-03 | |
| AAFC02012500_1 | 21 | 11,820,092 | MCTP2 | 1.82E-03 |
| AAFC02012500_2 | 21 | 11,820,201 | MCTP2 | 3.93E-03 |
| rs29026011 | 21 | 13,254,954 | LOC618464 | 3.00E-03 |
| rs29019629 | 21 | 33,209,686 | CSPG4 | 2.01E-03 |
| rs29011202 | 24 | 18,493,192 | 9.08E-03 | |
| AJ496776 | 28 | 31,495,721 | 5.74E-03 |
All locations determined by blast to bovine sequence version 4.0. Threshold of significance is p ≤ 1.7 × 10-5 and suggestive significance p ≤ 10-4 is denoted as *.