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. 2010 Mar 4;26(8):1043–1049. doi: 10.1093/bioinformatics/btq097

Table 2.

Bootstrap estimates of pA

Source Norm nb Prop Est SE 90% CI
UM-MDA231 Qspline 39 0.75 0.788 0.023 (0.746, 0.819)
37 0.50 0.529 0.065 (0.396, 0.604)
10 0.25 0.304 0.108 (0.180, 0.437)
UM-MCF7 Quantile 100 0.75 0.722 0.086 (0.596, 0.863)
0.50 0.448 0.057 (0.375, 0.553)
0.25 0.286 0.031 (0.265, 0.336)
MAQC-ILM Cubic 40 0.75 0.776 0.041 (0.710, 0.842)
55 0.25 0.303 0.021 (0.275, 0.335)
MAQC-AFFX MAS5 14 0.75 0.763 0.040 (0.688, 0.805)
68 0.25 0.270 0.027 (0.232, 0.317)
BIIB500 MAS5 100 0.80 0.761 0.031 (0.697, 0.800)
0.60 0.576 0.048 (0.508, 0.659)
0.40 0.493 0.053 (0.388, 0.567)
0.20 0.208 0.101 (0.092, 0.381)
BIIB100 MAS5 100 0.80 0.752 0.021 (0.722, 0.789)
0.60 0.518 0.050 (0.437, 0.593)
0.40 0.443 0.050 (0.365, 0.527)
0.20 0.190 0.093 (0.067, 0.347)

Source, data source; Norm, normalization; nb, number of bootstrap samples; Prop, true value of pA; Est, bootstrap point estimate, SE, bootstrap standard error; 90% CI , 90% bootstrap confidence interval. Bold values denotes cases where the true pA is not in the interval.