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. Author manuscript; available in PMC: 2010 Apr 13.
Published in final edited form as: J Org Chem. 2009 Feb 6;74(3):1070–1081. doi: 10.1021/jo802037v

Table 5.

Energetics derived from thermal denaturation curves of duplexes between N2'-pyrene-functionalized 2'-amino-α-L-LNA and DNA/RNA.a

Complementary DNA
Complementary RNA
ON Sequence ΔG298 [ΔΔG298] (kJ/mol) ΔH [ΔΔH] (kJ/mol) T298ΔS [Δ(T298ΔS)] (kJ/mol) ΔG298 [ΔΔG298] (kJ/mol) ΔH [ΔΔH] (kJ/mol) T298ΔS [Δ(T298ΔS)] (kJ/mol)
D1 5′-GTG ATA TGC –41 –327 –286 –38 –275 –237
W2 5′-GTG AWA TGC –53 [–12] –307 [+20] –254 [+32] –44 [–6] –328 [–53] –284 [–47]
X2 5′-GTG AXA TGC –59 [–18] –348 [–21] –289 [–3] –49 [–11] –343 [–68] –294 [–57]
Y2 5′-GTG AYA TGC –54 [–13] –321 [+6] –267 [+19] –48 [–10] –333 [–58] –285 [–48]
Z2 5′-GTG AZA TGC –46 [–5] –336 [–9] –290 [–4] ND ND ND
a

See Table 4 for conditions.