Table 2.
structure | excited states | Excited-State Properties of Squid Rhodopsin |
|||||
---|---|---|---|---|---|---|---|
gas phase |
protein |
||||||
λ | f | R | λ | f | R | ||
WT | S1 | 604 | 0.93 | 0.16 | 490 | 1.14 | 0.32 |
S2 | 429 | 0.30 | 0.48 | 393 | 0.14 | 0.16 | |
N87‡ | S1 | 510 | 1.10 | 0.32 | |||
S2 | 397 | 0.17 | 0.20 | ||||
Y111‡ | S1 | 501 | 1.12 | 0.31 | |||
S2 | 395 | 0.15 | 0.18 | ||||
E180‡ | S1 | 591 | 0.98 | 0.17 | |||
S2 | 422 | 0.29 | 0.42 | ||||
DM | S1 | 577 | 1.06 | -0.08 | 471 | 1.22 | 0.07 |
S2 | 425 | 0.16 | 0.16 | 392 | 0.05 | 0.04 | |
N87┴ | S1 | 504 | 1.15 | 0.00 | |||
S2 | 402 | 0.11 | 0.09 | ||||
Y111┴ | S1 | 478 | 1.19 | 0.03 | |||
S2 | 394 | 0.09 | 0.07 | ||||
E180┴ | S1 | 551 | 1.10 | -0.01 | |||
S2 | 419 | 0.14 | 0.11 | ||||
SBRcip | S1 | 318 | 1.50 | 0.22 | 335 | 0.00 | 0.00 |
S2 | 326 | 0.05 | 0.02 | 314 | 1.59 | 0.31 | |
N87¶ | S1 | 335 | 0.02 | 0.01 | |||
S2 | 319 | 1.56 | 0.32 | ||||
Y111¶ | S1 | 334 | 0.01 | 0.01 | |||
S2 | 315 | 1.58 | 0.32 | ||||
E180¶ | S1 | 323 | 1.51 | 0.29 | |||
S2 | 334 | 0.05 | 0.02 | ||||
SBRcidp | S1 | 322 | 1.52 | 0.32 | 333 | 0.00 | 0.00 |
S2 | 333 | 0.05 | 0.03 | 313 | 1.58 | 0.34 | |
N87# | S1 | 332 | 0.00 | 0.01 | |||
S2 | 313 | 1.53 | 0.28 | ||||
Y111# | S1 | 333 | 0.02 | 0.00 | |||
S2 | 313 | 1.57 | 0.32 | ||||
E180# | S1 | 327 | 1.47 | 0.29 | |||
S2 | 332 | 0.07 | 0.03 |
Charges of N87, Y111, and E180 are turned off, one at a time, in the corresponding ‡WT, ┴DM, ¶SBRcip, and #SBRcidp QM/MM calculations.
cipCounterion Glu180 is protonated (charge = 0). cidpCounterion Glu180 is deprotonated (charge = −1). The properties of the optically allowed transition are given in bold.