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. 2010 Apr 14;5(4):e9798. doi: 10.1371/journal.pone.0009798

Table 2. Number and percentage of genes significantly different between each pair of conditions at different significance thresholds.

Statistical threshold WT vs. AP in vitro WT vs. AP in vivo WT vitro vs. vivo AP vitro vs. vivo
P<0.05 137 (5.9%) 167 (7.2%) 266 (11.4%) 203 (8.7%)
P<0.01 57 (2.45%) 59 (2.53%) 124 (5.32%) 95 (4.08%)
P<0.05 + FDR* 9 (0.39%) 9 (0.39%) 32 (1.37%) 20 (0.86%)

*Benjamini and Hochberg false-discovery rate (FDR) test.