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. 2010 Apr 15;6(4):e1000911. doi: 10.1371/journal.pgen.1000911

Table 1. Gene-specific primer pairs used to characterise the different AhMTP1 paralogues in real-time quantitative RT–PCR analyses.

Gene Primer name Primer sequence 5′--3′ Annealing temperature (°C) Average PCR efficiencies
gDNA cDNA
Actin ActinF GGTAACATTGTGCTCAGTGGTGG 65.9 1.87 1.90
ActinR AACGACCTTAATCTTCATGCTGC
AhMTP1-A1 &A2 ARTF AGTGGTGAACATCATAATGGCTGTTC 67.2 1.96 1.93
ACRTR TCGATTTGTCCAACAGTTGCTCAG
AhMTP1-B BRTF TGGACGTGAAGTTATGGAGAC 64.3 2.06 2.04
BRTR CTTCACATTTGGGCTATCACAG
AhMTP1-C CRTF GGTGAACATCATAATGGCTGTTATGCTG 67.8 1.98 NP a
ACRTR TCGATTTGTCCAACAGTTGCTCAG
AhMTP1-D DRTF GTACACCCAGAGAGATTGACGCCG 71.3 1.91 NP a
DRTR GACTAATGTTGTACTCCCTGCGGATG

a NP: Not possible to be done (see Materials and Methods).