Table 1.
Gene | Forward primera (5′ to 3′) | Reverse primer (5′ to 3′) | Product (bp) |
---|---|---|---|
(a) Degenerate primer pairs used to amplify fragments of reference genes | |||
act1 | GTIGCICCIGARGARCAYCCI | ACRTCIACRTCRCAYTTCAT | 548 |
gpd1 | GTIAARATHGTIAAYGAYAAYTT | GCIACIACISWITRYTCIGGYTT | 873 |
tef1 | GTCCTCAGTCTTGTCATTTTTTTTCCT | GGAGGGGCCTGTCTGTGGGAC | 906 |
sar1 | CTCGACAAYGCCGGAAAGAC | TTGCCAAGGATGACAAAGGGG | 833 |
28S | GGAACCTTTCCCCACTTC | AGTACCCGCTGAACTTAA | 1,461 |
(b) Primer pairs used for quantification of transcripts by real-time PCR | |||
gpr1 | TTGATCCAGACCTTCATGCCAGC | CATAAAAGGCCGCGACACGAA | |
gpr2 | CTGCCCTCGTGTACATCTTCC | GCCTTCAGATGAGTGAAAGTCG | |
gpr3 | GCCAGCATTGGAACCATCATCG | CCCAACACCAGATCGTAGCTCCA | |
gpr4 | ATTCTAACTGGAGCCTGGTC | GTACTTTGTGGCTCTGGTTG | |
act1 | GCACGGAATCGCTCGTTG | TTCTCCACCCCGCCAAGC | |
gpd1 | CGTCGTAGTCCTTGTGGTTGACACC | TCCTCCCACGGTCTCTTCAAGG | |
sar1 | CTCGACAATGCCGGAAAGACCA | TTGCCAAGGATGACAAAGGGG | |
tef1 | TACTTCCCAGGCTGACTGCGCTAT | GGAGGGGCCTGTCTGTGGGAC | |
28S | TTTGAGTAAGAGCATACGGGGCC | GTTGATACATTCGAATGCCCACGT |
R = A or G, Y = C or T, I = inosine (panel A)