Table 1.
NMR distance and dihedral constraints | ComAC dimera |
---|---|
Distance constraints | |
Total NOE | 3,639 |
Intramolecular | 3,150 (~87%)b |
Intermolecular | 489 (~13%)b |
Unambiguous | 2,316 |
Intraresidue | 700 |
Sequential (|i – j| = 1) | 791 |
Medium range (|i – j| <4) | 1050 |
Long range (|i – j| >5) | 1098 |
Ambiguous | 1323 |
Hydrogen bonds | 103 |
Total dihedral angle restraints | |
ϕ | 172 |
ψ | 172 |
Structure statistics | |
Energies (kcal mol−1) | |
van der Waals | −1416 ± −9 |
Electrostatic | −5325 ± −98 |
Average violations per structure | |
NOEs and/or hydrogen bonds | 0 |
Dihedrals | 0 |
Violations (mean and S.D.) | |
Distance constraints (Å) | 0.035 ± 0.005 |
Hydrogen bonds (Å) | 0.054 ± 0.002 |
Dihedral angle constraints (degrees) | 0.672 ± 0.024 |
Deviations from idealized geometry | |
Bond lengths (Å) | 0.00470 ± 0.00007 |
Bond angles (degrees) | 0.615 ± 0.008 |
Impropers (degrees) | 1.60 ± 0.04 |
Average pairwise r.m.s.d.c (Å) | |
Secondary structure (backbone) | 0.20 ± 0.04 |
Secondary structure (heavy) | 0.56 ± 0.06 |
Backbone | 0.39 ± 0.11 |
Heavy | 0.90 ± 0.06 |
Ramachandran analysis | |
Most favored | 84.2% |
Additional allowed | 10.3% |
Generously allowed | 5.4% |
Disallowed | 0.1% |
Statistics for all dimer residues
Percentage of total NOE’s
Pairwise r.m.s.d. was calculated among the 10 lowest energy refined structures.