TABLE 1.
Summary of C. elegans transcripts showing greater than 2-fold change in expression during Y. pestis infection
Group | Gene | Fold-changea | p valueb | Group | Gene | Fold-changea | p valueb |
---|---|---|---|---|---|---|---|
CUB-like domain | F35E12.5 | 62.54 | 0.0062 | Proteolysis/hydrolysis | W03G1.7 | 13.55 | 0.0111 |
C32H11.10 | 12.43 | 0.0355 | F53A9.1 | 9.37 | 0.0195 | ||
C32H11.12 | 9.97 | 0.0217 | C05C10.4 | 5.48 | 0.0457 | ||
F55G11.5 | 6.82 | 0.0178 | K10C2.3 | 5.12 | 0.0189 | ||
C32H11.4 | 6.52 | 0.0217 | F21F8.4 | 4.45 | 0.0470 | ||
F35E12.6 | 6.25 | 0.0217 | K11D2.2 | 3.36 | 0.0264 | ||
F08G5.6 | 6.21 | 0.0195 | T10H4.12 | 2.57 | 0.0314 | ||
C17H12.8 | 4.94 | 0.032 | F55F3.2 | 2.20 | 0.0195 | ||
F55G11.8 | 4.68 | 0.0219 | F54F11.2 | 2.18 | 0.0256 | ||
K08D8.5 | 3.59 | 0.0256 | F27E5.1 | 2.10 | 0.0195 | ||
ZK896.5 | 2.57 | 0.0149 | Y16B4A.2 | 2.09 | 0.0460 | ||
H20E11.1 | 2.03 | 0.0298 | C55B7.3 | −2.48 | 0.0249 | ||
K10D11.5 | 2.00 | 0.0441 | Lipid metabolism | F54F3.3 | 11.53 | 0.0173 | |
T05E12.6 | −4.52 | 0.0217 | Y65B4BR.1 | 10.01 | 0.0249 | ||
Sugar binding | F56D6.15 | 10.09 | 0.0173 | K03H6.2 | 8.91 | 0.0062 | |
F56D6.2 | 9.24 | 0.0233 | B0035.13 | 5.97 | 0.0227 | ||
ZK666.6 | 6.88 | 0.0438 | F09C8.1 | 4.95 | 0.0382 | ||
F35C5.5 | 3.77 | 0.0282 | F28H7.3 | 3.31 | 0.0217 | ||
F35C5.9 | 3.59 | 0.0256 | W06D12.3 | −4.66 | 0.0216 | ||
F40F4.6 | 3.42 | 0.0283 | Metabolic Process | F41E6.5 | 4.71 | 0.0460 | |
Y54G2A.14 | 2.79 | 0.0282 | T25B9.7 | 2.03 | 0.0256 | ||
F38A5.3 | 2.74 | 0.0322 | D1054.8 | −2.55 | 0.0460 | ||
Y54G2A.8 | 2.58 | 0.0329 | C17C3.12 | −3.33 | 0.0139 | ||
F21H7.4 | 2.47 | 0.0329 | F47C10.6 | −3.83 | 0.0305 | ||
F35C5.8 | 2.00 | 0.0329 | C30G12.2 | −4.08 | 0.0382 | ||
T09F5.9 | −4.19 | 0.0460 | C04F5.7 | −4.33 | 0.0322 | ||
Neuropeptide-like | F45E4.8 | 7.78 | 0.0327 | C55B7.4 | −8.32 | 0.0441 | |
Y45F10A.5 | 2.63 | 0.0295 | Transport | K09C8.1 | 4.26 | 0.0178 | |
F37A8.4 | 2.58 | 0.0364 | C18H9.5 | −2.41 | 0.0012 | ||
M01D7.5 | 2.54 | 0.0371 | C35A5.3 | −4.12 | 0.0219 | ||
T23E7.4 | 2.26 | 0.0233 | T10H9.5 | −5.40 | 0.0280 |
a Fold change represents the ratio of expression in C. elegans exposed to Y. pestis relative to expression on E. coli. Average expression levels from three samples were used to calculate fold change.
b p values represent the corrected p value for multiple comparisons using the Benjamini-Hochberg method with a cutoff of 0.05.