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. Author manuscript; available in PMC: 2011 Jun 1.
Published in final edited form as: Neuroimage. 2010 Mar 1;51(2):677–683. doi: 10.1016/j.neuroimage.2010.02.048

Table 1. Spatial Normalization Template and Software Reporting In BrainMap.

The BrainMap database is an online archive of published neuroimaging results in the form of stereotactic coordinates (Fox and Lancaster, 2002; Laird et al., 2005a). As of September 2009, BrainMap contained a total of 1822 functional neuroimaging papers, with publication dates ranging from August 1985 to August 2009. The template and software used during spatial normalization is recorded for each paper. A total of 797 papers published coordinates in Talairach space (43.7%) (citing either the 1988 or 1967 atlases). This includes 27 papers that referenced the Human Brain Atlas (Roland et al., 1993), which are arguably not Talairach coordinates. There were 873 papers that published results in which subject brains were normalized relative to MNI space (47.9%), and 152 papers that normalized to MNI space but stated that they used the Brett transform to convert their MNI coordinates to Talairach coordinates (8.3%).

Template - Software Number of Papers Total Percent

Total Talairach 1988 or 1967 797 43.7%

Talairach 1988 374 20.4
Talairach 1988 – AFNI 115 6.3
Talairach 1988 – AIR 27 1.5
Talairach 1988 – BRAINS 11 0.6
Talairach 1988 – Brain Voyager 66 3.6
Talairach 1988 – BrainVOX 2 0.1
Talairach 1988 – Human Brain Atlas 27 1.5
Talairach 1988 – LIPSIA 26 1.4
Talairach 1988 – MedX 28 1.5
Talairach 1988 – SPM 4.0 3 0.2
Talairach 1988 – SPM94 5 0.3
Talairach 1988 – SPM95 103 5.7

 Talairach 1967:HD6 5 0.3
 Talairach 1967:vf25 5 0.3

Total MNI 873 47.9%

 MNI – FSL 38 2.1
 MNI – In-House 46 2.5
 MNI – SPM5 19 1.0
 MNI – SPM2 204 11.3
 MNI – SPM96 130 7.1
 MNI – SPM97 28 1.5
 MNI – SPM98 1 0.1
 MNI – SPM99 386 21.3
 MNI – Unknown SPM 13 0.7
 MNI – Other Software 8 0.3

Total Brett Transform 152 8.3%

Brett Transform – SPM5 3 0.2
Brett Transform – SPM2 56 3.0
Brett Transform – SPM96 5 0.3
Brett Transform – SPM97 1 0.1
Brett Transform – SPM99 85 4.6
Brett Transform – Other Software 2 0.1

Total 1822 100%