TABLE 3.
Rate constants
These are rate constants for ADP release in the absence and presence of mismatched DNA (mmDNA) and the rate and apparent affinity constants for release from mismatched DNA for wild type and D693N MutS in the absence and presence of magnesium. ND, not determined.
MutS | ADP exchange, koffADP |
Release from mismatch |
||
---|---|---|---|---|
No DNA | mmDNA | Rate | K½ATP | |
s−1 | s−1 | s−1 | mm | |
Wild type | ||||
Mg2+ | 0.0072 ± 0.0006 | 0.076 ± 0.029 | 0.24 ± 0.01 | 0.019 ± 0.003 |
EDTA | 0.00068 ± 0.0 | 0.049 ± 0.04 | 0.12 ± 0.01 | 1.2 ± 0.2 |
D693N | ||||
Mg2+ | 0.0066 ± 0.0004 | 0.091 ± 0.07 | 0.16 ± 0.006 | 0.42 ± 0.05 |
EDTA | ND | 0.033 ± 0.01 | 0.032 ± 0.003 | 0.18 ± 0.03 |