Table 2.
Summary of the significant HIF pathway candidate genes for the four test statistics used to detect signatures of positive selection
Test for natural selection | ||||
---|---|---|---|---|
Gene name |
LSBL | lnRH | Tajima's D Difference |
WGLRH |
ADRA1B | X | |||
ARNT2 | X | |||
ATP1A1 | X | |||
ATP1A2 | X | |||
CDH1 | X | X | ||
COPS5 | X | |||
CXCR4 | X | |||
EDN1 | X | |||
EDNRA | X | X | X | |
EGLN1 | X | |||
EGLN2 | X | |||
ELF2 | X | X | ||
FRAP1 | X | |||
IL1A/ | X | |||
IL1B | ||||
IL6 | X | |||
IGFBP1 | X | |||
IGFBP2 | X | |||
MDM2 | X | |||
MMP2 | X | |||
NOS1 | X | |||
NOS2A | X | X | X | |
NOTCH1 | X | |||
NRP1 | X | |||
NRP2 | X | |||
POLRA | X | |||
PIK3CA | X | X | ||
PIK3CG | X | |||
PRKAA1 | X | X | X | |
PRKAA2 | X | |||
SNAI3 | X | |||
SPRY2 | X | |||
TF | X | |||
TGFA | X | |||
TNC | X | X | ||
TNF | X | |||
VEGF | X | X |
LSBL = locus-specific branch length; lnRH = natural log of the ratio of heterozygosities; WGLRH = whole-genome long-range haplotype.