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. Author manuscript; available in PMC: 2010 Apr 21.
Published in final edited form as: Nature. 2009 Jun 14;460(7254):473–478. doi: 10.1038/nature08162

Figure 2.

Figure 2

Profiling of nucleosomes and their modifications at HOXD. For high-throughput sequencing, we display the mapped sequencing reads from D1 or a donor pool (red or orange bars; normalized difference score), and their significance (green or blue bars; FDR of 20 is <1% and FDR of 30 is <0.1%). a, The HOXD locus (black box) and an uncharacterized flanking locus (green oval). b, Profiling of nucleosome modifications at HOXD (in part a). The y-axis is signal intensity (log2, for ChIP-chip), or the normalized difference score for sequencing. The regions not tiled on the array are underlined in red.