. Author manuscript; available in PMC: 2010 Apr 21.

Published in final edited form as: Comp Biochem Physiol Part D Genomics Proteomics. 2008 Oct 17;4(1):21–31. doi: 10.1016/j.cbd.2008.09.003

Table 4.

Analysis of proteins changing after prolonged anoxia (Gel 3).

Spot ID	Protein identification	Protein accession number	Est. % coverage	Spectral count	24N > +24hN	Fold Change 24N > +24hA	48N > +24hA
1333					1.01	4.13	4.15
	spectrin alpha 2	gi\|62203376	19%	4
	Krt4 protein	gi\|44890667	8%	3
3267					1.41	3.54	2.54
	annexin A11b	gi\|32401408	22%	7
	serine hydroxymethyltransferase 1 (soluble)	gi\|41054918	14%	7
	CAP, adenylate cyclase-associated protein 1	gi\|41054003	8%	4
	mitochondrial ATP synthase alpha subunit	gi\|44969408	6%	2
3453					−2.92	2.41	7.13
	elongation factor 1-alpha	gi\|18858587	26%	15
	vitellogenin 5	gi\|68448530	7%	4
3845					4.19	−2.25	−9.36
	Krt4 protein	gi\|44890667	51%	49
	Suclg2 protein	gi\|33989739	33%	12
	alpha-cardiac actin	gi\|6636384	19%	8
	bactin1	gi\|18858335	16%	6
3917					1.08	−2.39	−2.55
	similar to RNA binding motif protein 4	gi\|47086959	58%	31
	vitellogenin 5	gi\|68448530	12%	12
	similar to vitellogenin	gi\|68400037	5%	8
	Aldolase b, fructose-bisphosphate	gi\|29477118	27%	5
	glutamate oxaloacetate transaminase 2	gi\|41053395	7%	3
	aldolase A	gi\|22671688	15%	5
3983					−1.48	2.41	3.61
	similar to cathepsin L isoform 2	gi\|68369808	25%	5
	annexin A4	gi\|32401412	14%	5
	dihydrodiol dehydrogenase	gi\|53933262	8%	2
4091					−2.07	2.77	5.81
	Krt4 protein	gi\|44890667	49%	32
	keratin 18	gi\|29335504	61%	29
	cathepsin D	gi\|18858489	21%	7
	heterogeneous nuclear ribonucleoprotein C	gi\|47085809	21%	9
	ubiquitin carboxyl-terminal hydrolase	gi\|47085817	16%	6
4124					2.45	3.02	1.24
	tropomyosin 2 (beta)	gi\|50344894	52%	22
	alpha-tropomyosin	gi\|18859505	34%	16
	nucleophosmin 1	gi\|40786521	18%	3
	signal sequence receptor, alpha	gi\|41151978	8%	2
	Krt4 protein	gi\|44890667	11%	2
	keratin 18	gi\|29335504	35%	2
4153					1.51	3.44	2.31
	Krt4 protein	gi\|44890667	43%	26
	proteasome (prosome, macropain) 26S subunit, ATPase, 3	gi\|50344782	14%	11
4180					1.13	4.37	3.90
	Krt4 protein	gi\|44890667	45%	28
	keratin 18	gi\|29335504	32%	15
	heterogeneous nuclear ribonucleoprotein C	gi\|47085809	19%	7
4242					−1.48	−5.22	−3.50
	nascent polypeptide-associated complex alpha polypeptide	gi\|27545279	33%	7
4253					1.47	6.86	4.71
	Krt4 protein	gi\|44890667	39%	21
	alpha-tropomyosin	gi\|18859505	21%	5
4464					−1.05	2.31	2.44
	nascent polypeptide-associated complex alpha polypeptide	gi\|27545279	24%	3
4568					−1.23	2.24	2.78
	splicing factor, arginine/serine-rich 2	gi\|47087067	20%	4
	OTU domain, ubiquitin aldehyde binding 1, like	gi\|50539890	8%	2
5427					−1.69	4.27	7.31
	peroxiredoxin 1	gi\|61806512	33%	8
	vitellogenin 1	gi\|25092674	7%	6
	proteasome (prosome, macropain) subunit, beta type, 2	gi\|50540284	25%	9
	splicing factor, arginine/serine-rich 3 isoform 2	gi\|41151986	25%	4
5531					1.47	3.18	4.61
	vitellogenin 5	gi\|68448530	10%	4
5665					1.48	4.71	3.21
	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide like	gi\|41152453	9%	2
5807					−1.66	−11.25	−6.70
	muscle cofilin 2	gi\|47271384	26%	3
	basic transcription factor 3-like 4	gi\|41152344	5%	2
6006					1.57	−2.29	−3.56
	ADP-ribosylation factor 1	gi\|41393073	17%	3
6108					1.43	−2.36	−3.35
	troponin C, fast skeletal	gi\|18859495	25%	3
	calmodulin 2 [Homo sapiens]	gi\|4502549	44%	5