Skip to main content
. Author manuscript; available in PMC: 2011 Apr 27.
Published in final edited form as: Biochemistry. 2010 Apr 27;49(16):3487–3498. doi: 10.1021/bi100294m

Table 2.

Summary of Amino Acid Substitutions Made to the Putative rS-HPCDH35 Catalytic Residues Using Site-Directed Mutagenesis a

amino acid postulated catalytic role(s)b substitution Km (μM S-HPC) kcat (s-1) kcat/Km (M-1 s-1)
none 31 ± 0.9 25 ± 0.2 7.5 × 105
S143 H-bond donor to substrate/charge stabilization of the transition state S143A 9500 ± 2500 0.013 ± 0.001 1.4 × 100
Y156 general acid/base Y156A 1800 ± 200 0.65 ± 0.02 3.5 × 102
Y156F no activityc
K160 lowers pKa of Y156/coenzyme binding K160A no activityc
a

Assays contained 66 μg of S143A or 20 μg of Y156A, 5 mM NAD+ and variable concentration of S-HPC.

b

Postulated catalytic roles are based on a general trend found in most SDR enzymes (including R-HPCDH).

c

No activity was defined as no measurable change in the absorbance at 340 nm (for NADH) in assays containing 100 μg protein, 2.5 mM S-HPC and 20 mM NAD+. Apparent kcat and Km values are reported as means ± standard errors. All other values are reported as means only. All assays were performed in triplicate at 30 °C with fixed concentrations of NAD+. Apparent kinetic constants were determined by fitting experimental data to the standard form of the Michaelis-Menten equation.