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. 2010 Apr 23;5(4):e10256. doi: 10.1371/journal.pone.0010256

Table 1. BLASTN search results of de novo assembly contigs against database of Influenza virus sequences.

Euler-SR_contigs Contig length (bp) Virus segment Top hit of accession number using BLASTN search against databse of Influenza virus sequences Length of subject (bp) Identities Contig location for A/Toronto/T0106/2009(H1N1)
>826 183 2835 183 1 gb|GQ328865|INFLUENZA A virus (A/Finland/553/2009(H1N1)) segment 1 polymerase PB2 (PB2) 2345 167/168 (99%) 5–168
>324 1558 136 1558 1 gb|GQ365425|INFLUENZA A virus (A/Fukushima/1/2009(H1N1)) segment 1 polymerase PB2 (PB2) 2280 1556/1558 (99%) 201–1758
>1194 239 112 239 1 gb|GQ894926|INFLUENZA A virus (A/Delaware/03/2009(H1N1)) segment 1 polymerase PB2 (PB2) 2280 214/214 (100%) 1894–2107
>887 174 3294 174 1 gb|GQ894833|INFLUENZA A virus (A/Rhode Island/08/2009(H1N1)) segment 1 polymerase PB2 (PB2) 2280 156/156 (100%) 2145–2300
>890 2204 4651 2204 2 gb|GQ894924|INFLUENZA A virus (A/New Mexico/04/2009(H1N1)) segment 2 polymerase PB1 (PB1) 2274 2200/2204 (99%) 41–2244
>696 2198 3968 2198 3 gb|GQ866924|INFLUENZA A virus (A/Thailand/CU-H106/2009(H1N1)) segment 3 polymerase PA (PA) 2238 2152/2155 (99%) 54–2208
>868 1761 3831 1761 4 gb|CY045503|INFLUENZA A virus (A/Bayern/66/2009(H1N1)) segment 4 sequence 1754 1750/1754 (99%) 1–1741
>897 1514 1710 1514 5 gb|GQ502907|INFLUENZA A virus (A/Toronto/R8557/2009(H1N1)) segment 5 nucleocapsid protein 1558 1511/1514 (99%) 36–1549
>224 101 9 101 6 gb|GQ502908|INFLUENZA A virus (A/Toronto/R8557/2009(H1N1)) segment 6 neuraminidase (NA) 1458 101/101 (100%) 3–103
>1206 1302 2468 1302 6 gb|GQ906584|INFLUENZA A virus (A/Stockholm/49/2009(H1N1)) segment 6 neuraminidase (NA) 1447 1299/1300 (99%) 124–1423
>750 1019 1128 1019 7 gb|CY045957|INFLUENZA A virus (A/Toronto/T0106/2009(H1N1)) segment 7 sequence 1026 1017/1017 (100%) 9–1025
>809 834 4399 834 8 gb|GQ485660|INFLUENZA A virus (A/Ekaterinburg/01/2009(H1N1)) segment 8 nuclear export 877 828/830 (99%) 52–881

Schematic representation of contigs is shown in Fig. 2.