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. Author manuscript; available in PMC: 2010 Apr 24.
Published in final edited form as: Thorax. 2009 Apr 8;64(8):698–704. doi: 10.1136/thx.2008.111278

Table 3.

Associations of SNPs in IL6 with rate of decline of FEV1 in the LHS and association with COPD in the NETT-NAS

LD (r2 with rs1800795) Rate of FEV1 decline study in the LHS COPD case control study in the NETT-NAS

Bin SNP ID SNP in gene LHS NETT-NAS Fast decline MAF % Non-decline MAF % p-value genotype based p-value additive NETT MAF % NAS MAF % p-value§ genotype based p-value§ additive
1 rs1800797 −598G/A NA 0.93 0.41 0.35 0.06 0.02
1 rs1800795* −174G/C - - 0.45 0.40 0.006 0.041 0.42 0.36 0.03 0.01
1 rs2069832 615A/G NA 0.98 0.42 0.37 0.1 0.09
1 rs1474348 1090G/C NA 0.97 0.41 0.36 0.1 0.04
1 rs1474347 1306G/T NA 0.98 0.42 0.36 0.06 0.03

2 rs1554606* 1889G/T 0.84 0.87 0.47 0.43 0.011 0.103 0.44 0.38 0.02 0.01
2 rs2069845* 3331G/A 0.89 NA 0.47 0.42 0.007 0.078

3 rs2069825* −1479CT/− 0.90 NA 0.44 0.37 < 0.001 0.023

4 rs2069840* 1754C/G 0.36 0.33 0.32 0.37 0.005 0.064 0.35 0.36 0.3 0.7

5 rs1818879* 5909G/A 0.32 NA 0.29 0.34 0.012 0.035

6 rs2069827* −1363G/T 0.12 0.14 0.08 0.08 0.786 0.669 0.09 0.09 0.9 0.4

other rs2069849 4338C/T NA 0.02 0.03 0.02 0.2 0.2
*

Genotyped in the LHS,

Genotyped in the NETT-NAS

Adjustment for confounding factors such as age, gender, pack-years of smoking, and research center.

§

As the NAS controls were uniformly male smokers with normal lung function, the models were adjusted for age and pack-years.

The p values were from a dominant genetic model because the minor allele frequency of this SNP was very low.

HHS Vulnerability Disclosure