Table 3.
Comparison of haplotypes (rs2619539-rs3213207-rs2619538) in Williams et al.34 and in the HapMap samples
Haplotype | Cardiff sample |
Dublin sample |
CEU | JPT+CHB | YRI | ||
---|---|---|---|---|---|---|---|
Cases | Controls | Cases | Controls | ||||
GAA | 0.13 | 0.14 | 0.11 | 0.11 | 0.117 | 0.011 | 0.183 |
CAA a | 0.29 | 0.35 | 0.30 | 0.37 | 0.375 | 0.467 | |
GGA | 0.10 | 0.08 | 0.10 | 0.10 | 0.117 | 0.006 | 0.025 |
GAT | 0.26 | 0.24 | 0.28 | 0.26 | 0.233 | 0.633 | 0.075 |
CAT b | 0.21 | 0.16 | 0.21 | 0.15 | 0.158 | 0.350 | 0.250 |
GGT a | 0.00 | 0.03 | 0.00 | 0.02 |
Protective haplotypes in the two studied samples (Cardiff and Dublin samples).
Risk haplotype in the two studied samples.